The rapid A-Ci response: photosynthesis in the phenomic era.
Identifieur interne : 001155 ( Main/Exploration ); précédent : 001154; suivant : 001156The rapid A-Ci response: photosynthesis in the phenomic era.
Auteurs : Joseph R. Stinziano [États-Unis, Canada] ; Patrick B. Morgan [États-Unis] ; Douglas J. Lynch [États-Unis] ; Aaron J. Saathoff [États-Unis] ; Dayle K. Mcdermitt [États-Unis] ; David T. Hanson [États-Unis]Source :
- Plant, cell & environment [ 1365-3040 ] ; 2017.
Descripteurs français
- KwdFr :
- MESH :
- métabolisme : Dioxyde de carbone, Populus.
- Photosynthèse, Phénotype.
English descriptors
- KwdEn :
- MESH :
- chemical , metabolism : Carbon Dioxide.
- metabolism : Populus.
- Phenotype, Photosynthesis.
Abstract
Phenotyping for photosynthetic gas exchange parameters is limiting our ability to select plants for enhanced photosynthetic carbon gain and to assess plant function in current and future natural environments. This is due, in part, to the time required to generate estimates of the maximum rate of ribulose-1,5-bisphosphate carboxylase oxygenase (Rubisco) carboxylation (Vc,max ) and the maximal rate of electron transport (Jmax ) from the response of photosynthesis (A) to the CO2 concentration inside leaf air spaces (Ci ). To relieve this bottleneck, we developed a method for rapid photosynthetic carbon assimilation CO2 responses [rapid A-Ci response (RACiR)] utilizing non-steady-state measurements of gas exchange. Using high temporal resolution measurements under rapidly changing CO2 concentrations, we show that RACiR techniques can obtain measures of Vc,max and Jmax in ~5 min, and possibly even faster. This is a small fraction of the time required for even the most advanced gas exchange instrumentation. The RACiR technique, owing to its increased throughput, will allow for more rapid screening of crops, mutants and populations of plants in natural environments, bringing gas exchange into the phenomic era.
DOI: 10.1111/pce.12911
PubMed: 28247953
Affiliations:
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Morgan</name><affiliation wicri:level="1"><nlm:affiliation>LI-COR Inc., Lincoln, NE, 68504, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>LI-COR Inc., Lincoln, NE, 68504</wicri:regionArea><wicri:noRegion>68504</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>School of Natural Resources, University of Nebraska-Lincoln, Lincoln, NE, 68583, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>School of Natural Resources, University of Nebraska-Lincoln, Lincoln, NE, 68583</wicri:regionArea><wicri:noRegion>68583</wicri:noRegion></affiliation></author><author><name sortKey="Lynch, Douglas J" sort="Lynch, Douglas J" uniqKey="Lynch D" first="Douglas J" last="Lynch">Douglas J. Lynch</name><affiliation wicri:level="1"><nlm:affiliation>LI-COR Inc., Lincoln, NE, 68504, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>LI-COR Inc., Lincoln, NE, 68504</wicri:regionArea><wicri:noRegion>68504</wicri:noRegion></affiliation></author><author><name sortKey="Saathoff, Aaron J" sort="Saathoff, Aaron J" uniqKey="Saathoff A" first="Aaron J" last="Saathoff">Aaron J. Saathoff</name><affiliation wicri:level="1"><nlm:affiliation>LI-COR Inc., Lincoln, NE, 68504, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>LI-COR Inc., Lincoln, NE, 68504</wicri:regionArea><wicri:noRegion>68504</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>School of Natural Resources, University of Nebraska-Lincoln, Lincoln, NE, 68583, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>School of Natural Resources, University of Nebraska-Lincoln, Lincoln, NE, 68583</wicri:regionArea><wicri:noRegion>68583</wicri:noRegion></affiliation></author><author><name sortKey="Mcdermitt, Dayle K" sort="Mcdermitt, Dayle K" uniqKey="Mcdermitt D" first="Dayle K" last="Mcdermitt">Dayle K. Mcdermitt</name><affiliation wicri:level="1"><nlm:affiliation>LI-COR Inc., Lincoln, NE, 68504, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>LI-COR Inc., Lincoln, NE, 68504</wicri:regionArea><wicri:noRegion>68504</wicri:noRegion></affiliation></author><author><name sortKey="Hanson, David T" sort="Hanson, David T" uniqKey="Hanson D" first="David T" last="Hanson">David T. Hanson</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biology, The University of New Mexico, Albuquerque, NM, 87104, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, The University of New Mexico, Albuquerque, NM, 87104</wicri:regionArea><wicri:noRegion>87104</wicri:noRegion></affiliation></author></analytic><series><title level="j">Plant, cell & environment</title><idno type="eISSN">1365-3040</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Carbon Dioxide (metabolism)</term><term>Phenotype (MeSH)</term><term>Photosynthesis (MeSH)</term><term>Populus (metabolism)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Dioxyde de carbone (métabolisme)</term><term>Photosynthèse (MeSH)</term><term>Phénotype (MeSH)</term><term>Populus (métabolisme)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Carbon Dioxide</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Populus</term></keywords><keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Dioxyde de carbone</term><term>Populus</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Phenotype</term><term>Photosynthesis</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Photosynthèse</term><term>Phénotype</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Phenotyping for photosynthetic gas exchange parameters is limiting our ability to select plants for enhanced photosynthetic carbon gain and to assess plant function in current and future natural environments. This is due, in part, to the time required to generate estimates of the maximum rate of ribulose-1,5-bisphosphate carboxylase oxygenase (Rubisco) carboxylation (V<sub>c,max</sub> ) and the maximal rate of electron transport (J<sub>max</sub> ) from the response of photosynthesis (A) to the CO<sub>2</sub> concentration inside leaf air spaces (C<sub>i</sub> ). To relieve this bottleneck, we developed a method for rapid photosynthetic carbon assimilation CO<sub>2</sub> responses [rapid A-C<sub>i</sub> response (RACiR)] utilizing non-steady-state measurements of gas exchange. Using high temporal resolution measurements under rapidly changing CO<sub>2</sub> concentrations, we show that RACiR techniques can obtain measures of V<sub>c,max</sub> and J<sub>max</sub> in ~5 min, and possibly even faster. This is a small fraction of the time required for even the most advanced gas exchange instrumentation. The RACiR technique, owing to its increased throughput, will allow for more rapid screening of crops, mutants and populations of plants in natural environments, bringing gas exchange into the phenomic era.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">28247953</PMID><DateCompleted><Year>2018</Year><Month>01</Month><Day>15</Day></DateCompleted><DateRevised><Year>2018</Year><Month>01</Month><Day>15</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1365-3040</ISSN><JournalIssue CitedMedium="Internet"><Volume>40</Volume><Issue>8</Issue><PubDate><Year>2017</Year><Month>Aug</Month></PubDate></JournalIssue><Title>Plant, cell & environment</Title><ISOAbbreviation>Plant Cell Environ</ISOAbbreviation></Journal><ArticleTitle>The rapid A-C<sub>i</sub> response: photosynthesis in the phenomic era.</ArticleTitle><Pagination><MedlinePgn>1256-1262</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1111/pce.12911</ELocationID><Abstract><AbstractText>Phenotyping for photosynthetic gas exchange parameters is limiting our ability to select plants for enhanced photosynthetic carbon gain and to assess plant function in current and future natural environments. This is due, in part, to the time required to generate estimates of the maximum rate of ribulose-1,5-bisphosphate carboxylase oxygenase (Rubisco) carboxylation (V<sub>c,max</sub> ) and the maximal rate of electron transport (J<sub>max</sub> ) from the response of photosynthesis (A) to the CO<sub>2</sub> concentration inside leaf air spaces (C<sub>i</sub> ). To relieve this bottleneck, we developed a method for rapid photosynthetic carbon assimilation CO<sub>2</sub> responses [rapid A-C<sub>i</sub> response (RACiR)] utilizing non-steady-state measurements of gas exchange. Using high temporal resolution measurements under rapidly changing CO<sub>2</sub> concentrations, we show that RACiR techniques can obtain measures of V<sub>c,max</sub> and J<sub>max</sub> in ~5 min, and possibly even faster. This is a small fraction of the time required for even the most advanced gas exchange instrumentation. The RACiR technique, owing to its increased throughput, will allow for more rapid screening of crops, mutants and populations of plants in natural environments, bringing gas exchange into the phenomic era.</AbstractText><CopyrightInformation>© 2017 The Authors Plant, Cell & Environment Published by John Wiley & Sons Ltd.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Stinziano</LastName><ForeName>Joseph R</ForeName><Initials>JR</Initials><Identifier Source="ORCID">http://orcid.org/0000-0002-7628-4201</Identifier><AffiliationInfo><Affiliation>Department of Biology, The University of New Mexico, Albuquerque, NM, 87104, USA.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Biology, The University of Western Ontario, London, Ontario, N6A 5B7, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Morgan</LastName><ForeName>Patrick B</ForeName><Initials>PB</Initials><AffiliationInfo><Affiliation>LI-COR Inc., Lincoln, NE, 68504, USA.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>School of Natural Resources, University of Nebraska-Lincoln, Lincoln, NE, 68583, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Lynch</LastName><ForeName>Douglas J</ForeName><Initials>DJ</Initials><AffiliationInfo><Affiliation>LI-COR Inc., Lincoln, NE, 68504, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Saathoff</LastName><ForeName>Aaron J</ForeName><Initials>AJ</Initials><AffiliationInfo><Affiliation>LI-COR Inc., Lincoln, NE, 68504, USA.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>School of Natural Resources, University of Nebraska-Lincoln, Lincoln, NE, 68583, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>McDermitt</LastName><ForeName>Dayle K</ForeName><Initials>DK</Initials><AffiliationInfo><Affiliation>LI-COR Inc., Lincoln, NE, 68504, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hanson</LastName><ForeName>David T</ForeName><Initials>DT</Initials><Identifier Source="ORCID">http://orcid.org/0000-0003-0964-9335</Identifier><AffiliationInfo><Affiliation>Department of Biology, The University of New Mexico, Albuquerque, NM, 87104, USA.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>03</Month><Day>01</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Plant Cell Environ</MedlineTA><NlmUniqueID>9309004</NlmUniqueID><ISSNLinking>0140-7791</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>142M471B3J</RegistryNumber><NameOfSubstance UI="D002245">Carbon Dioxide</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><CommentsCorrectionsList><CommentsCorrections RefType="CommentIn"><RefSource>New Phytol. 2019 Jan;221(2):625-627</RefSource><PMID Version="1">30198151</PMID></CommentsCorrections></CommentsCorrectionsList><MeshHeadingList><MeshHeading><DescriptorName UI="D002245" MajorTopicYN="N">Carbon Dioxide</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010641" MajorTopicYN="N">Phenotype</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010788" MajorTopicYN="Y">Photosynthesis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">A-Ci</Keyword><Keyword MajorTopicYN="N">C3</Keyword><Keyword MajorTopicYN="N">CO2</Keyword><Keyword MajorTopicYN="N">carboxylation</Keyword><Keyword MajorTopicYN="N">gas exchange</Keyword><Keyword MajorTopicYN="N">phenotyping</Keyword><Keyword MajorTopicYN="N">photosynthesis</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2016</Year><Month>11</Month><Day>23</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2017</Year><Month>01</Month><Day>13</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2017</Year><Month>01</Month><Day>15</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2017</Year><Month>3</Month><Day>2</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2018</Year><Month>1</Month><Day>16</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2017</Year><Month>3</Month><Day>2</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">28247953</ArticleId><ArticleId IdType="doi">10.1111/pce.12911</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Canada</li><li>États-Unis</li></country></list><tree><country name="États-Unis"><noRegion><name sortKey="Stinziano, Joseph R" sort="Stinziano, Joseph R" uniqKey="Stinziano J" first="Joseph R" last="Stinziano">Joseph R. Stinziano</name></noRegion><name sortKey="Hanson, David T" sort="Hanson, David T" uniqKey="Hanson D" first="David T" last="Hanson">David T. Hanson</name><name sortKey="Lynch, Douglas J" sort="Lynch, Douglas J" uniqKey="Lynch D" first="Douglas J" last="Lynch">Douglas J. Lynch</name><name sortKey="Mcdermitt, Dayle K" sort="Mcdermitt, Dayle K" uniqKey="Mcdermitt D" first="Dayle K" last="Mcdermitt">Dayle K. Mcdermitt</name><name sortKey="Morgan, Patrick B" sort="Morgan, Patrick B" uniqKey="Morgan P" first="Patrick B" last="Morgan">Patrick B. Morgan</name><name sortKey="Morgan, Patrick B" sort="Morgan, Patrick B" uniqKey="Morgan P" first="Patrick B" last="Morgan">Patrick B. Morgan</name><name sortKey="Saathoff, Aaron J" sort="Saathoff, Aaron J" uniqKey="Saathoff A" first="Aaron J" last="Saathoff">Aaron J. Saathoff</name><name sortKey="Saathoff, Aaron J" sort="Saathoff, Aaron J" uniqKey="Saathoff A" first="Aaron J" last="Saathoff">Aaron J. Saathoff</name></country><country name="Canada"><noRegion><name sortKey="Stinziano, Joseph R" sort="Stinziano, Joseph R" uniqKey="Stinziano J" first="Joseph R" last="Stinziano">Joseph R. Stinziano</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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